Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
COL25A1Q9BXS0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 ACTBP11-201ENST00000436287 1126 ntBASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 KRT8P23-201ENST00000560090 1207 ntBASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 AC026150.2-201ENST00000564693 1156 ntBASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 AC006128.1-201ENST00000624704 1661 ntBASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL25A1Q9BXS0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COL25A1Q9BXS0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COL25A1Q9BXS0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
COL25A1Q9BXS0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC002056.1-201ENST00000395613 760 ntBASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC007967.3-201ENST00000434308 558 ntBASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC119751.2-201ENST00000504529 210 ntBASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 RHOQP1-201ENST00000555758 579 ntBASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL25A1Q9BXS0 AL163051.1-201ENST00000569214 1512 ntBASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 CXCL1P1-201ENST00000502804 216 ntBASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AC140912.1-201ENST00000577171 1054 ntBASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AC099568.2-201ENST00000609194 695 ntBASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL25A1Q9BXS0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL25A1Q9BXS0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms