Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SHANK2-AS3Q9BTD1 PRORSD1P-202ENST00000563365 2154 ntBASIC13.95□□□□□ -0.18
SHANK2-AS3Q9BTD1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL645608.8-201ENST00000606034 2086 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 GCSHP5-201ENST00000443090 522 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 DUTP2-201ENST00000519164 463 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AP003071.4-201ENST00000562276 1284 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC092338.2-201ENST00000568827 1415 ntBASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SHANK2-AS3Q9BTD1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 UNC93B2-201ENST00000285383 730 ntBASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC098590.1-201ENST00000468126 897 ntBASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.93□□□□□ -0.18
SHANK2-AS3Q9BTD1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC139713.2-201ENST00000641328 2723 ntBASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 RBM17P1-201ENST00000453646 1190 ntBASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms