Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 AP003071.4-201ENST00000562276 1284 ntBASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 AL158047.1-201ENST00000445918 881 ntBASIC17■□□□□ 0.31
CPPED1Q9BRF8 RBM17P1-201ENST00000453646 1190 ntBASIC17■□□□□ 0.31
CPPED1Q9BRF8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 BX088651.1-201ENST00000540551 451 ntBASIC17■□□□□ 0.31
CPPED1Q9BRF8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CPPED1Q9BRF8 LINC00602-201ENST00000629776 2065 ntBASIC17■□□□□ 0.31
CPPED1Q9BRF8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17■□□□□ 0.31
CPPED1Q9BRF8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 AC099398.1-201ENST00000567919 2776 ntBASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 CCR12P-201ENST00000446203 998 ntBASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.99■□□□□ 0.31
CPPED1Q9BRF8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 AP001094.4-201ENST00000579008 2176 ntBASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 AC007663.1-201ENST00000438948 1240 ntBASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 HTR7P1-202ENST00000624664 4411 ntBASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CPPED1Q9BRF8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms