Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMOQ99835 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.93■□□□□ 0.62
SMOQ99835 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.93■□□□□ 0.62
SMOQ99835 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.93■□□□□ 0.62
SMOQ99835 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.93■□□□□ 0.62
SMOQ99835 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.93■□□□□ 0.62
SMOQ99835 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.93■□□□□ 0.62
SMOQ99835 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.93■□□□□ 0.62
SMOQ99835 BNIP3P18-201ENST00000593976 575 ntBASIC18.93■□□□□ 0.62
SMOQ99835 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SMOQ99835 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.93■□□□□ 0.62
SMOQ99835 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMOQ99835 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMOQ99835 KRT8P47-201ENST00000604727 1398 ntBASIC18.93■□□□□ 0.62
SMOQ99835 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 AC138894.3-201ENST00000603787 634 ntBASIC18.92■□□□□ 0.62
SMOQ99835 AL138831.2-201ENST00000606564 490 ntBASIC18.92■□□□□ 0.62
SMOQ99835 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SMOQ99835 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMOQ99835 AP000997.3-201ENST00000623333 2250 ntBASIC18.91■□□□□ 0.62
SMOQ99835 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 AC125634.1-201ENST00000438758 1403 ntBASIC18.91■□□□□ 0.62
SMOQ99835 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SMOQ99835 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SMOQ99835 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMOQ99835 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMOQ99835 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMOQ99835 TSPY19P-201ENST00000418461 509 ntBASIC18.91■□□□□ 0.62
SMOQ99835 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 TSPY18P-201ENST00000441642 509 ntBASIC18.91■□□□□ 0.62
SMOQ99835 MINOS1P3-201ENST00000457048 203 ntBASIC18.91■□□□□ 0.62
SMOQ99835 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.91■□□□□ 0.62
SMOQ99835 AL732292.2-201ENST00000609649 430 ntBASIC18.91■□□□□ 0.62
SMOQ99835 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.91■□□□□ 0.62
SMOQ99835 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.91■□□□□ 0.62
SMOQ99835 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMOQ99835 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMOQ99835 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms