Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.16■□□□□ 0.5
NDNQ99608 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDNQ99608 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 AC008894.3-201ENST00000624324 3103 ntBASIC18.15■□□□□ 0.5
NDNQ99608 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
NDNQ99608 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.15■□□□□ 0.5
NDNQ99608 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.15■□□□□ 0.5
NDNQ99608 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.15■□□□□ 0.5
NDNQ99608 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 AC010240.3-201ENST00000607688 395 ntBASIC18.15■□□□□ 0.5
NDNQ99608 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.15■□□□□ 0.5
NDNQ99608 AC134043.2-201ENST00000624206 2238 ntBASIC18.15■□□□□ 0.5
NDNQ99608 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NDNQ99608 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDNQ99608 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
NDNQ99608 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDNQ99608 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDNQ99608 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.14■□□□□ 0.49
NDNQ99608 AC046158.3-201ENST00000624947 2558 ntBASIC18.14■□□□□ 0.49
NDNQ99608 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.14■□□□□ 0.49
NDNQ99608 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NDNQ99608 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.14■□□□□ 0.49
NDNQ99608 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.14■□□□□ 0.49
NDNQ99608 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.14■□□□□ 0.49
NDNQ99608 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.14■□□□□ 0.49
NDNQ99608 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 LINC01568-207ENST00000641790 1380 ntBASIC18.14■□□□□ 0.49
NDNQ99608 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.14■□□□□ 0.49
NDNQ99608 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NDNQ99608 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
NDNQ99608 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.14■□□□□ 0.49
NDNQ99608 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.14■□□□□ 0.49
NDNQ99608 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDNQ99608 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.14■□□□□ 0.49
NDNQ99608 FLJ13224-201ENST00000313737 1514 ntBASIC18.13■□□□□ 0.49
NDNQ99608 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.13■□□□□ 0.49
NDNQ99608 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
NDNQ99608 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.13■□□□□ 0.49
NDNQ99608 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.13■□□□□ 0.49
NDNQ99608 AC084018.2-201ENST00000613093 2607 ntBASIC18.13■□□□□ 0.49
NDNQ99608 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.13■□□□□ 0.49
NDNQ99608 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
NDNQ99608 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NDNQ99608 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 SEC1P-202ENST00000473944 940 ntBASIC18.13■□□□□ 0.49
NDNQ99608 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.13■□□□□ 0.49
NDNQ99608 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDNQ99608 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.13■□□□□ 0.49
NDNQ99608 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms