Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLCC1Q96S66 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CLCC1Q96S66 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CLCC1Q96S66 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.27■□□□□ 0.03
CLCC1Q96S66 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.27■□□□□ 0.03
CLCC1Q96S66 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCC1Q96S66 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCC1Q96S66 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCC1Q96S66 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLCC1Q96S66 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 TSPY21P-201ENST00000433481 731 ntBASIC15.26■□□□□ 0.03
CLCC1Q96S66 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.26■□□□□ 0.03
CLCC1Q96S66 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLCC1Q96S66 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 AC008764.6-201ENST00000595909 2069 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 AL353807.1-201ENST00000427475 662 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 GCSHP5-201ENST00000443090 522 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 KSR1P1-201ENST00000446298 240 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 AF186192.3-201ENST00000583427 947 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 AL445675.2-201ENST00000620291 557 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 KRT16P1-201ENST00000399124 1418 ntBASIC15.25■□□□□ 0.03
CLCC1Q96S66 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CLCC1Q96S66 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLCC1Q96S66 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLCC1Q96S66 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCC1Q96S66 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCC1Q96S66 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms