Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAB3IPQ96QF0 FLJ38576-201ENST00000623820 2459 ntBASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 GPX1P1-201ENST00000388829 606 ntBASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
RAB3IPQ96QF0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 AC133963.1-201ENST00000504166 1679 ntBASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB3IPQ96QF0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IPQ96QF0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IPQ96QF0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RAB3IPQ96QF0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IPQ96QF0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB3IPQ96QF0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB3IPQ96QF0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms