Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSPG4P5Q96PW8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 VENTXP5-201ENST00000523979 775 ntBASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 LINC01311-201ENST00000565162 1445 ntBASIC18.66■□□□□ 0.58
CSPG4P5Q96PW8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 AC005332.8-201ENST00000622750 2735 ntBASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SPDYE13P-201ENST00000445314 798 ntBASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 AC004263.2-201ENST00000617183 678 ntBASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG4P5Q96PW8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CSPG4P5Q96PW8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 ZNF444P1-201ENST00000559497 298 ntBASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AC083849.1-201ENST00000615227 514 ntBASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CSPG4P5Q96PW8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms