Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 LINC01451-201ENST00000623792 534 ntBASIC15.57■□□□□ 0.08
CMTM3Q96MX0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 AC073111.5-205ENST00000641717 521 ntBASIC15.57■□□□□ 0.08
CMTM3Q96MX0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.57■□□□□ 0.08
CMTM3Q96MX0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 AC080038.1-201ENST00000611274 1154 ntBASIC15.56■□□□□ 0.08
CMTM3Q96MX0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.56■□□□□ 0.08
CMTM3Q96MX0 LINC01126-201ENST00000623515 1646 ntBASIC15.56■□□□□ 0.08
CMTM3Q96MX0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CMTM3Q96MX0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 AC018695.7-201ENST00000624587 2492 ntBASIC15.55■□□□□ 0.08
CMTM3Q96MX0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 MIR663A-201ENST00000385250 93 ntBASIC15.55■□□□□ 0.08
CMTM3Q96MX0 AL023284.2-201ENST00000405850 579 ntBASIC15.55■□□□□ 0.08
CMTM3Q96MX0 AC026185.1-201ENST00000445748 174 ntBASIC15.55■□□□□ 0.08
CMTM3Q96MX0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 KRT16P5-201ENST00000455284 522 ntBASIC15.55■□□□□ 0.08
CMTM3Q96MX0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CMTM3Q96MX0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms