Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM2Q96JY6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 AL163051.1-201ENST00000569214 1512 ntBASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM2Q96JY6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 REXO1L11P-201ENST00000620964 1927 ntBASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PDLIM2Q96JY6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CYP2T1P-202ENST00000641596 2535 ntBASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AC034236.2-201ENST00000606662 1610 ntBASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 MIR149-201ENST00000384879 89 ntBASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AC016769.1-201ENST00000409132 1010 ntBASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 DUSP5P2-201ENST00000426873 1033 ntBASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM2Q96JY6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
PDLIM2Q96JY6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms