Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A3Q93084 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A3Q93084 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 LINC00265-3P-201ENST00000447588 903 ntBASIC19.06■□□□□ 0.64
ATP2A3Q93084 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 RN7SL510P-201ENST00000581311 263 ntBASIC19.06■□□□□ 0.64
ATP2A3Q93084 AC005332.3-201ENST00000589904 676 ntBASIC19.06■□□□□ 0.64
ATP2A3Q93084 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A3Q93084 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ATP2A3Q93084 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 LETM1P2-201ENST00000597330 2178 ntBASIC19.05■□□□□ 0.64
ATP2A3Q93084 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 AC004870.1-201ENST00000315132 882 ntBASIC19.05■□□□□ 0.64
ATP2A3Q93084 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 AL390719.2-201ENST00000606993 987 ntBASIC19.05■□□□□ 0.64
ATP2A3Q93084 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ATP2A3Q93084 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
ATP2A3Q93084 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 AP000867.3-201ENST00000524675 377 ntBASIC19.04■□□□□ 0.64
ATP2A3Q93084 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 AC012615.1-201ENST00000565797 1299 ntBASIC19.04■□□□□ 0.64
ATP2A3Q93084 GPR32P1-201ENST00000601788 811 ntBASIC19.04■□□□□ 0.64
ATP2A3Q93084 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.04■□□□□ 0.64
ATP2A3Q93084 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ATP2A3Q93084 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms