Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.53■□□□□ 0.88
TNFRSF25Q93038 AC022898.2-201ENST00000616822 1312 ntBASIC20.53■□□□□ 0.88
TNFRSF25Q93038 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 AC087388.1-201ENST00000571370 1112 ntBASIC20.52■□□□□ 0.88
TNFRSF25Q93038 AL353801.3-201ENST00000609898 542 ntBASIC20.52■□□□□ 0.88
TNFRSF25Q93038 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.52■□□□□ 0.88
TNFRSF25Q93038 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TNFRSF25Q93038 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNFRSF25Q93038 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TNFRSF25Q93038 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 PCED1CP-201ENST00000419887 785 ntBASIC20.51■□□□□ 0.87
TNFRSF25Q93038 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 MTCL1P1-201ENST00000446207 792 ntBASIC20.51■□□□□ 0.87
TNFRSF25Q93038 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TNFRSF25Q93038 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 KRT8P26-201ENST00000534154 1276 ntBASIC20.5■□□□□ 0.87
TNFRSF25Q93038 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TNFRSF25Q93038 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 AC016734.2-201ENST00000624325 1377 ntBASIC20.49■□□□□ 0.87
TNFRSF25Q93038 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 MIR1224-201ENST00000408193 85 ntBASIC20.49■□□□□ 0.87
TNFRSF25Q93038 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFRSF25Q93038 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms