Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
HPS1Q92902 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 AC141586.3-201ENST00000562166 1838 ntBASIC16.58■□□□□ 0.24
HPS1Q92902 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HPS1Q92902 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.58■□□□□ 0.24
HPS1Q92902 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HPS1Q92902 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS1Q92902 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.57■□□□□ 0.24
HPS1Q92902 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 AP003071.4-201ENST00000562276 1284 ntBASIC16.57■□□□□ 0.24
HPS1Q92902 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 CD177P1-201ENST00000606252 935 ntBASIC16.57■□□□□ 0.24
HPS1Q92902 AL353708.3-201ENST00000610272 989 ntBASIC16.57■□□□□ 0.24
HPS1Q92902 AC133561.5-201ENST00000635547 218 ntBASIC16.57■□□□□ 0.24
HPS1Q92902 AC097493.4-201ENST00000641197 219 ntBASIC16.57■□□□□ 0.24
HPS1Q92902 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HPS1Q92902 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.57■□□□□ 0.24
HPS1Q92902 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
HPS1Q92902 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HPS1Q92902 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HPS1Q92902 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 LINC01126-201ENST00000623515 1646 ntBASIC16.56■□□□□ 0.24
HPS1Q92902 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.56■□□□□ 0.24
HPS1Q92902 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HPS1Q92902 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HPS1Q92902 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
HPS1Q92902 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms