Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.63■■□□□ 1.37
RAPGEF4Q8WZA2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 UNC93B6-202ENST00000528242 690 ntBASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 AL691403.2-201ENST00000618460 490 ntBASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RAPGEF4Q8WZA2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 BX005266.1-201ENST00000473402 457 ntBASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 AC079776.2-201ENST00000641154 1609 ntBASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.61■■□□□ 1.37
RAPGEF4Q8WZA2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 UPF3AP3-201ENST00000420996 769 ntBASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 AC055717.3-201ENST00000622967 595 ntBASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAPGEF4Q8WZA2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 ESPNP-201ENST00000270691 2015 ntBASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 AC010327.4-202ENST00000591484 748 ntBASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 AL022326.1-202ENST00000641533 845 ntBASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 PMPCAP1-201ENST00000508114 1576 ntBASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
RAPGEF4Q8WZA2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RAPGEF4Q8WZA2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms