Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AL627389.1-201ENST00000413508 1182 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC092580.3-201ENST00000430932 139 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 PFN1P12-201ENST00000455938 534 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC068137.2-201ENST00000605408 478 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 AL158211.3-201ENST00000607385 239 ntBASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC7.25□□□□□ -1.25
SYNE2Q8WXH0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AGER-203ENST00000375065 665 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 MIR1227-201ENST00000408484 88 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AL355306.1-201ENST00000415580 579 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SPDYE11-202ENST00000450699 704 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 KRT8P13-201ENST00000463294 1010 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC126915.1-201ENST00000522847 1038 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SPDYE9P-201ENST00000570642 692 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SPDYE10P-202ENST00000612005 668 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SPDYE8P-202ENST00000612377 668 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 GPAA1P2-201ENST00000417923 928 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 RHOQP3-201ENST00000437982 621 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC099522.2-201ENST00000607001 744 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC026120.1-201ENST00000611536 926 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AC104417.2-201ENST00000562989 1793 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AL512430.1-201ENST00000392575 860 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 RN7SL837P-201ENST00000463010 287 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AL136301.1-201ENST00000615830 422 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 FO681548.1-201ENST00000455617 1132 ntBASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SYNE2Q8WXH0 SIGLEC16-201ENST00000599858 1437 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms