Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AC034105.1-201ENST00000563488 319 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AL356488.2-201ENST00000602755 427 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AC140113.2-201ENST00000604370 208 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 Z83851.2-201ENST00000609564 659 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 AC107918.4-202ENST00000641623 219 ntBASIC14.03□□□□□ -0.16
LINC01006Q8NI28 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LINC01006Q8NI28 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC14.02□□□□□ -0.16
LINC01006Q8NI28 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 AC007967.3-201ENST00000434308 558 ntBASIC14.02□□□□□ -0.17
LINC01006Q8NI28 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 AC105339.3-201ENST00000560043 636 ntBASIC14.02□□□□□ -0.17
LINC01006Q8NI28 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LINC01006Q8NI28 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 AC005104.2-201ENST00000427818 678 ntBASIC14.01□□□□□ -0.17
LINC01006Q8NI28 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 AC092183.1-201ENST00000469884 875 ntBASIC14.01□□□□□ -0.17
LINC01006Q8NI28 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01006Q8NI28 AC132938.6-201ENST00000623828 1655 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms