Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.4■□□□□ 0.06
CLDND2Q8NHS1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 Z98044.1-201ENST00000632503 1764 ntBASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 HEIH-201ENST00000623091 1652 ntBASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 AP003733.1-201ENST00000491725 852 ntBASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 KRT18P1-202ENST00000452408 1331 ntBASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CLDND2Q8NHS1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 AL691432.3-201ENST00000621860 400 ntBASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 Z83836.1-201ENST00000624605 1642 ntBASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 AL357033.4-201ENST00000617703 1807 ntBASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 AC067852.2-201ENST00000590513 2313 ntBASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLDND2Q8NHS1 AC139713.2-201ENST00000641328 2723 ntBASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms