Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 ESPNP-201ENST00000270691 2015 ntBASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SPTSSBQ8NFR3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 Z98044.1-201ENST00000632503 1764 ntBASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 WIZP1-201ENST00000531444 2299 ntBASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 STRCP1-201ENST00000509801 5328 ntBASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC9.93□□□□□ -0.82
SPTSSBQ8NFR3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SPTSSBQ8NFR3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms