Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AC138028.4-201ENST00000564984 1845 ntBASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 KRT18P38-201ENST00000449496 1282 ntBASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AL049597.2-201ENST00000565575 961 ntBASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SRFBP1Q8NEF9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SRFBP1Q8NEF9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 AC022898.2-201ENST00000616822 1312 ntBASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 MIR662-201ENST00000384847 95 ntBASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 AC092597.1-201ENST00000487352 616 ntBASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 DUTP2-201ENST00000519164 463 ntBASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRFBP1Q8NEF9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.25■□□□□ 0.35
SRFBP1Q8NEF9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms