Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 SDHAP2-201ENST00000455183 2001 ntBASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 RBM17P3-201ENST00000417687 1192 ntBASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MTDHP3-201ENST00000594186 672 ntBASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COLGALT1Q8NBJ5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 AC009533.2-201ENST00000543664 586 ntBASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 AC139887.3-201ENST00000568585 713 ntBASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 AP001269.4-201ENST00000609611 512 ntBASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 FAM215A-202ENST00000632077 792 ntBASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 AL138781.2-201ENST00000617896 1843 ntBASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
COLGALT1Q8NBJ5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 MYLKP1-201ENST00000509077 1580 ntBASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 AC009154.2-201ENST00000621177 724 ntBASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.44■□□□□ 0.7
COLGALT1Q8NBJ5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.43■□□□□ 0.7
COLGALT1Q8NBJ5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms