Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 AC009078.2-202ENST00000463353 338 ntBASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 AC009065.1-201ENST00000564055 1225 ntBASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 GPR32P1-201ENST00000601788 811 ntBASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 AC034236.2-201ENST00000606662 1610 ntBASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC155Q8N6L0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 AL390961.4-201ENST00000623958 2535 ntBASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC155Q8N6L0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 VENTXP7-201ENST00000475503 772 ntBASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 AL662844.1-201ENST00000546340 181 ntBASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 AC104692.2-201ENST00000603054 253 ntBASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 AC138894.3-201ENST00000603787 634 ntBASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 AC068587.9-201ENST00000641814 219 ntBASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC155Q8N6L0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC155Q8N6L0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms