Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MIR3180-1-201ENST00000580374 94 ntBASIC19■□□□□ 0.63
CCDC33Q8N5R6 MIR3180-3-201ENST00000584616 94 ntBASIC19■□□□□ 0.63
CCDC33Q8N5R6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 AL136038.4-201ENST00000603606 1261 ntBASIC19■□□□□ 0.63
CCDC33Q8N5R6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 HTR7P1-202ENST00000624664 4411 ntBASIC19■□□□□ 0.63
CCDC33Q8N5R6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC33Q8N5R6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC33Q8N5R6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC33Q8N5R6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC33Q8N5R6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC33Q8N5R6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CCDC33Q8N5R6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 AP002414.4-201ENST00000589764 1148 ntBASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC33Q8N5R6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AL391807.1-203ENST00000604392 2365 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 KRT8P26-201ENST00000534154 1276 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 MIR3917-201ENST00000580971 93 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 RN7SL510P-201ENST00000581311 263 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AL354751.1-201ENST00000412768 1863 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC33Q8N5R6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 HLA-F-220ENST00000434407 884 ntBASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 KRT18P41-201ENST00000518924 1277 ntBASIC18.97■□□□□ 0.63
CCDC33Q8N5R6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms