Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC097488.1-201ENST00000507834 756 ntBASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC104390.1-201ENST00000555663 520 ntBASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC006058.3-201ENST00000606217 1069 ntBASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC116407.2-201ENST00000613639 860 ntBASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC01561Q8N1V8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 PCDHA12-202ENST00000613593 2588 ntBASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 HLA-L-209ENST00000420110 1011 ntBASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 NUDT16P1-203ENST00000513809 620 ntBASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 RPPH1-201ENST00000516869 333 ntBASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC01561Q8N1V8 LINC01126-201ENST00000623515 1646 ntBASIC12.15□□□□□ -0.47
LINC01561Q8N1V8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
LINC01561Q8N1V8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms