Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD2Q8IV50 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 KRT18P5-201ENST00000436075 1291 ntBASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD2Q8IV50 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD2Q8IV50 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 PHGDH-209ENST00000641074 1780 ntBASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 TUBB8P6-201ENST00000436895 1288 ntBASIC15.88■□□□□ 0.13
LYSMD2Q8IV50 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms