Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 MTCL1P1-201ENST00000446207 792 ntBASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 AC104819.1-201ENST00000504587 486 ntBASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM4Q86VH4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AL845331.1-201ENST00000424978 1190 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AC074051.2-201ENST00000565115 352 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 AL353801.3-201ENST00000609898 542 ntBASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM4Q86VH4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRTM4Q86VH4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRTM4Q86VH4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 KRT17P6-201ENST00000453795 1220 ntBASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM4Q86VH4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms