Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 AC008894.3-201ENST00000624324 3103 ntBASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF111Q6ZNA4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 KRT8P3-201ENST00000519669 1449 ntBASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 TSPY17P-201ENST00000450329 467 ntBASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF111Q6ZNA4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF111Q6ZNA4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF111Q6ZNA4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AC008556.1-201ENST00000610908 2040 ntBASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 KRT18P22-201ENST00000402024 1347 ntBASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AL353719.1-201ENST00000566847 864 ntBASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AC145285.6-201ENST00000604632 637 ntBASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 AL023803.3-201ENST00000615559 522 ntBASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF111Q6ZNA4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms