Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 CLDN5-201ENST00000403084 2357 ntBASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNKSR3Q6P9H4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 SPDYE21P-201ENST00000413323 827 ntBASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 MCCD1P2-201ENST00000423228 335 ntBASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 LINC02084-201ENST00000606069 1096 ntBASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNKSR3Q6P9H4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 AC132938.6-201ENST00000623828 1655 ntBASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 AC022898.2-201ENST00000616822 1312 ntBASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CNKSR3Q6P9H4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC010460.3-201ENST00000511359 1579 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC004817.3-201ENST00000602957 2129 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 KRT18P2-201ENST00000447938 1258 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC005829.1-201ENST00000570002 483 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AL589182.2-201ENST00000619332 1049 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNKSR3Q6P9H4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
CNKSR3Q6P9H4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms