Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC38Q5VT99 AC100803.2-201ENST00000562459 1963 ntBASIC18.79■□□□□ 0.6
LRRC38Q5VT99 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 LINC00602-201ENST00000629776 2065 ntBASIC18.78■□□□□ 0.6
LRRC38Q5VT99 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 RASA4DP-201ENST00000460726 1199 ntBASIC18.78■□□□□ 0.6
LRRC38Q5VT99 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 AC024563.2-201ENST00000603282 481 ntBASIC18.78■□□□□ 0.6
LRRC38Q5VT99 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LRRC38Q5VT99 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 AC140113.3-201ENST00000605663 199 ntBASIC18.77■□□□□ 0.6
LRRC38Q5VT99 AL023973.1-201ENST00000624619 620 ntBASIC18.77■□□□□ 0.6
LRRC38Q5VT99 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRRC38Q5VT99 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRRC38Q5VT99 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 KRT18P65-201ENST00000439811 1286 ntBASIC18.76■□□□□ 0.59
LRRC38Q5VT99 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 AC010203.1-204ENST00000548782 407 ntBASIC18.76■□□□□ 0.59
LRRC38Q5VT99 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.76■□□□□ 0.59
LRRC38Q5VT99 AC012306.2-201ENST00000609350 630 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms