Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AL353719.1-201ENST00000566847 864 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AP005242.2-201ENST00000580065 1175 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AC113410.3-201ENST00000623366 203 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
RUNDC3AQ59EK9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 AL355312.1-201ENST00000407115 2176 ntBASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RUNDC3AQ59EK9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RUNDC3AQ59EK9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 TSPY17P-201ENST00000450329 467 ntBASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 ITM2C-210ENST00000620962 501 ntBASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RUNDC3AQ59EK9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RUNDC3AQ59EK9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms