Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 AC005332.1-201ENST00000577698 1310 ntBASIC18.81■□□□□ 0.6
RAB6CQ53S08 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MIR1224-201ENST00000408193 85 ntBASIC18.81■□□□□ 0.6
RAB6CQ53S08 AL645929.1-201ENST00000420084 975 ntBASIC18.81■□□□□ 0.6
RAB6CQ53S08 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 AL390719.2-201ENST00000606993 987 ntBASIC18.81■□□□□ 0.6
RAB6CQ53S08 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 FZD10-202ENST00000539839 3282 ntBASIC18.81■□□□□ 0.6
RAB6CQ53S08 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RAB6CQ53S08 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 AC134043.2-201ENST00000624206 2238 ntBASIC18.8■□□□□ 0.6
RAB6CQ53S08 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 LINC01238-205ENST00000567549 1107 ntBASIC18.8■□□□□ 0.6
RAB6CQ53S08 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RAB6CQ53S08 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB6CQ53S08 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 AL136038.3-201ENST00000561909 1096 ntBASIC18.79■□□□□ 0.6
RAB6CQ53S08 AC087388.1-201ENST00000571370 1112 ntBASIC18.79■□□□□ 0.6
RAB6CQ53S08 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 GPR32P1-201ENST00000601788 811 ntBASIC18.79■□□□□ 0.6
RAB6CQ53S08 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB6CQ53S08 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB6CQ53S08 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms