Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 ACTG1P14-201ENST00000446382 1122 ntBASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 HCG4B-203ENST00000450128 991 ntBASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 AC109322.1-201ENST00000524499 1264 ntBASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RSPO4Q2I0M5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RSPO4Q2I0M5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RSPO4Q2I0M5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 TCF3P1-201ENST00000423021 1937 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 OR8S1-201ENST00000310194 1080 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 SIGLEC30P-201ENST00000455569 941 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 MEIS3P1-201ENST00000495167 958 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 AC009154.2-201ENST00000621177 724 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 AC079776.2-201ENST00000641154 1609 ntBASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RSPO4Q2I0M5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 FAM58CP-201ENST00000435741 640 ntBASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 AL390955.2-201ENST00000603032 514 ntBASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 KRT8P50-201ENST00000562022 1438 ntBASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RSPO4Q2I0M5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RSPO4Q2I0M5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms