Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 KRT17P6-201ENST00000453795 1220 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.3■□□□□ 0.36
ZIC1Q15915 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 AC074051.2-201ENST00000565115 352 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 AC012615.1-201ENST00000565797 1299 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 PRELID1P1-202ENST00000567272 903 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ZIC1Q15915 AC009154.2-201ENST00000621177 724 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.3■□□□□ 0.36
ZIC1Q15915 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ZIC1Q15915 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZIC1Q15915 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC1Q15915 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZIC1Q15915 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.3■□□□□ 0.36
ZIC1Q15915 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
ZIC1Q15915 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ZIC1Q15915 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 RNF165-205ENST00000588679 2904 ntBASIC17.29■□□□□ 0.36
ZIC1Q15915 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZIC1Q15915 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 DUTP2-201ENST00000519164 463 ntBASIC17.29■□□□□ 0.36
ZIC1Q15915 AC011840.4-201ENST00000578471 627 ntBASIC17.29■□□□□ 0.36
ZIC1Q15915 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC1Q15915 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.29■□□□□ 0.36
ZIC1Q15915 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 FLJ13224-201ENST00000313737 1514 ntBASIC17.29■□□□□ 0.36
ZIC1Q15915 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZIC1Q15915 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.29■□□□□ 0.36
ZIC1Q15915 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ZIC1Q15915 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ZIC1Q15915 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZIC1Q15915 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 AC138028.4-201ENST00000564984 1845 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 NOC2LP1-202ENST00000452600 2235 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 KRT18P65-201ENST00000439811 1286 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 MTCL1P1-201ENST00000446207 792 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 NUS1P1-201ENST00000446295 882 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.28■□□□□ 0.36
ZIC1Q15915 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 AC104819.1-201ENST00000504587 486 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.28■□□□□ 0.36
ZIC1Q15915 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.28■□□□□ 0.36
ZIC1Q15915 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 Z69720.1-201ENST00000601483 472 ntBASIC17.28■□□□□ 0.36
ZIC1Q15915 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZIC1Q15915 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.28■□□□□ 0.36
ZIC1Q15915 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZIC1Q15915 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms