Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
H3F3AP84243 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 FLJ13224-201ENST00000313737 1514 ntBASIC16.18■□□□□ 0.18
H3F3AP84243 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.18■□□□□ 0.18
H3F3AP84243 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
H3F3AP84243 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.18■□□□□ 0.18
H3F3AP84243 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H3F3AP84243 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.17■□□□□ 0.18
H3F3AP84243 AC138028.4-201ENST00000564984 1845 ntBASIC16.17■□□□□ 0.18
H3F3AP84243 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.17■□□□□ 0.18
H3F3AP84243 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.17■□□□□ 0.18
H3F3AP84243 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 Z83836.1-201ENST00000624605 1642 ntBASIC16.17■□□□□ 0.18
H3F3AP84243 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.17■□□□□ 0.18
H3F3AP84243 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.17■□□□□ 0.18
H3F3AP84243 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
H3F3AP84243 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.17■□□□□ 0.18
H3F3AP84243 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.17■□□□□ 0.18
H3F3AP84243 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.17■□□□□ 0.18
H3F3AP84243 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H3F3AP84243 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
H3F3AP84243 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 PCED1CP-201ENST00000419887 785 ntBASIC16.16■□□□□ 0.18
H3F3AP84243 KRT18P65-201ENST00000439811 1286 ntBASIC16.16■□□□□ 0.18
H3F3AP84243 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.16■□□□□ 0.18
H3F3AP84243 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H3F3AP84243 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
H3F3AP84243 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.16■□□□□ 0.18
H3F3AP84243 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.15■□□□□ 0.18
H3F3AP84243 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H3F3AP84243 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms