Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 SLC25A6P5-201ENST00000435663 894 ntBASIC15.64■□□□□ 0.09
UBA52P62987 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.64■□□□□ 0.09
UBA52P62987 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.64■□□□□ 0.09
UBA52P62987 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
UBA52P62987 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 AC018553.1-201ENST00000616682 1458 ntBASIC15.64■□□□□ 0.09
UBA52P62987 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.64■□□□□ 0.09
UBA52P62987 CROCCP1-201ENST00000426910 5675 ntBASIC15.64■□□□□ 0.09
UBA52P62987 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.64■□□□□ 0.09
UBA52P62987 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBA52P62987 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.63■□□□□ 0.09
UBA52P62987 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 AL645608.8-201ENST00000606034 2086 ntBASIC15.63■□□□□ 0.09
UBA52P62987 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 AC080080.1-201ENST00000625121 2420 ntBASIC15.63■□□□□ 0.09
UBA52P62987 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.63■□□□□ 0.09
UBA52P62987 INGX-201ENST00000359239 846 ntBASIC15.63■□□□□ 0.09
UBA52P62987 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.63■□□□□ 0.09
UBA52P62987 HMGA1P5-201ENST00000412453 271 ntBASIC15.63■□□□□ 0.09
UBA52P62987 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
UBA52P62987 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.63■□□□□ 0.09
UBA52P62987 AP000692.2-201ENST00000608391 879 ntBASIC15.63■□□□□ 0.09
UBA52P62987 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
UBA52P62987 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.63■□□□□ 0.09
UBA52P62987 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBA52P62987 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
UBA52P62987 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.63■□□□□ 0.09
UBA52P62987 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
UBA52P62987 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 AC046158.3-201ENST00000624947 2558 ntBASIC15.62■□□□□ 0.09
UBA52P62987 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.62■□□□□ 0.09
UBA52P62987 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.62■□□□□ 0.09
UBA52P62987 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.62■□□□□ 0.09
UBA52P62987 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.62■□□□□ 0.09
UBA52P62987 AC063952.2-201ENST00000498792 1227 ntBASIC15.62■□□□□ 0.09
UBA52P62987 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 AC091076.1-201ENST00000610741 619 ntBASIC15.62■□□□□ 0.09
UBA52P62987 AC011298.2-201ENST00000617989 482 ntBASIC15.62■□□□□ 0.09
UBA52P62987 AC130371.2-201ENST00000619443 611 ntBASIC15.62■□□□□ 0.09
UBA52P62987 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
UBA52P62987 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.62■□□□□ 0.09
UBA52P62987 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
UBA52P62987 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.62■□□□□ 0.09
UBA52P62987 RCC2P6-201ENST00000526625 1557 ntBASIC15.62■□□□□ 0.09
UBA52P62987 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.62■□□□□ 0.09
UBA52P62987 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
UBA52P62987 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
UBA52P62987 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms