Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.69□□□□□ -0.38
CKS1BP61024 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.69□□□□□ -0.38
CKS1BP61024 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CKS1BP61024 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 AC008741.2-201ENST00000612792 3115 ntBASIC12.69□□□□□ -0.38
CKS1BP61024 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CKS1BP61024 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CKS1BP61024 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.69□□□□□ -0.38
CKS1BP61024 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC12.69□□□□□ -0.38
CKS1BP61024 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CKS1BP61024 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CKS1BP61024 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS1BP61024 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CKS1BP61024 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CKS1BP61024 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS1BP61024 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 AC004911.1-201ENST00000416316 871 ntBASIC12.68□□□□□ -0.38
CKS1BP61024 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS1BP61024 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS1BP61024 MIR5787-201ENST00000611784 55 ntBASIC12.68□□□□□ -0.38
CKS1BP61024 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS1BP61024 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
CKS1BP61024 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS1BP61024 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 ANO7L1-203ENST00000602586 1720 ntBASIC12.68□□□□□ -0.38
CKS1BP61024 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS1BP61024 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS1BP61024 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CKS1BP61024 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CKS1BP61024 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS1BP61024 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CKS1BP61024 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS1BP61024 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms