Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.57■□□□□ 0.24
CDC42P60953 AC239809.2-201ENST00000415381 517 ntBASIC16.57■□□□□ 0.24
CDC42P60953 AC069152.1-201ENST00000438030 544 ntBASIC16.57■□□□□ 0.24
CDC42P60953 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC42P60953 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.57■□□□□ 0.24
CDC42P60953 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 AC093010.1-201ENST00000473625 1624 ntBASIC16.56■□□□□ 0.24
CDC42P60953 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 AC009102.3-201ENST00000623118 1491 ntBASIC16.56■□□□□ 0.24
CDC42P60953 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 AP001094.4-201ENST00000579008 2176 ntBASIC16.56■□□□□ 0.24
CDC42P60953 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 KRASP1-201ENST00000407852 552 ntBASIC16.56■□□□□ 0.24
CDC42P60953 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.56■□□□□ 0.24
CDC42P60953 MCCD1P1-208ENST00000445732 328 ntBASIC16.56■□□□□ 0.24
CDC42P60953 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.56■□□□□ 0.24
CDC42P60953 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.56■□□□□ 0.24
CDC42P60953 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CDC42P60953 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDC42P60953 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.56■□□□□ 0.24
CDC42P60953 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDC42P60953 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDC42P60953 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC42P60953 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.55■□□□□ 0.24
CDC42P60953 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDC42P60953 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDC42P60953 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDC42P60953 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.55■□□□□ 0.24
CDC42P60953 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.55■□□□□ 0.24
CDC42P60953 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.55■□□□□ 0.24
CDC42P60953 AC011298.2-201ENST00000617989 482 ntBASIC16.55■□□□□ 0.24
CDC42P60953 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC42P60953 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDC42P60953 LINC00602-201ENST00000629776 2065 ntBASIC16.55■□□□□ 0.24
CDC42P60953 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDC42P60953 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC42P60953 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.55■□□□□ 0.24
CDC42P60953 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDC42P60953 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDC42P60953 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.54■□□□□ 0.24
CDC42P60953 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.54■□□□□ 0.24
CDC42P60953 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 SDHAP2-201ENST00000455183 2001 ntBASIC16.54■□□□□ 0.24
CDC42P60953 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDC42P60953 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms