Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 AP001412.1-201ENST00000608405 714 ntBASIC16.7■□□□□ 0.26
SMIM11AP58511 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.7■□□□□ 0.26
SMIM11AP58511 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
SMIM11AP58511 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMIM11AP58511 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SMIM11AP58511 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 CRYGFP-201ENST00000418459 633 ntBASIC16.69■□□□□ 0.26
SMIM11AP58511 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMIM11AP58511 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM11AP58511 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM11AP58511 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SMIM11AP58511 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.68■□□□□ 0.26
SMIM11AP58511 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 DUTP2-201ENST00000519164 463 ntBASIC16.68■□□□□ 0.26
SMIM11AP58511 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SMIM11AP58511 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM11AP58511 AL359736.2-201ENST00000621992 437 ntBASIC16.68■□□□□ 0.26
SMIM11AP58511 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 AL645608.8-201ENST00000606034 2086 ntBASIC16.68■□□□□ 0.26
SMIM11AP58511 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMIM11AP58511 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM11AP58511 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMIM11AP58511 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 WWOX-216ENST00000569818 525 ntBASIC16.67■□□□□ 0.26
SMIM11AP58511 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.67■□□□□ 0.26
SMIM11AP58511 MIR4674-201ENST00000582457 87 ntBASIC16.67■□□□□ 0.26
SMIM11AP58511 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.67■□□□□ 0.26
SMIM11AP58511 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM11AP58511 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SMIM11AP58511 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms