Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CLDN2P57739 AL662844.1-201ENST00000546340 181 ntBASIC17.82■□□□□ 0.44
CLDN2P57739 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN2P57739 AC008608.2-201ENST00000606089 416 ntBASIC17.82■□□□□ 0.44
CLDN2P57739 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN2P57739 AC132938.6-201ENST00000623828 1655 ntBASIC17.82■□□□□ 0.44
CLDN2P57739 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.82■□□□□ 0.44
CLDN2P57739 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.82■□□□□ 0.44
CLDN2P57739 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLDN2P57739 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLDN2P57739 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 BX323043.1-201ENST00000641006 1765 ntBASIC17.81■□□□□ 0.44
CLDN2P57739 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN2P57739 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.81■□□□□ 0.44
CLDN2P57739 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 AL022342.1-201ENST00000400363 863 ntBASIC17.81■□□□□ 0.44
CLDN2P57739 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN2P57739 AC112698.1-201ENST00000510299 916 ntBASIC17.81■□□□□ 0.44
CLDN2P57739 AC009533.2-201ENST00000543664 586 ntBASIC17.81■□□□□ 0.44
CLDN2P57739 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN2P57739 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.81■□□□□ 0.44
CLDN2P57739 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLDN2P57739 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLDN2P57739 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLDN2P57739 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN2P57739 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN2P57739 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.8■□□□□ 0.44
CLDN2P57739 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.8■□□□□ 0.44
CLDN2P57739 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN2P57739 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.8■□□□□ 0.44
CLDN2P57739 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.8■□□□□ 0.44
CLDN2P57739 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLDN2P57739 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLDN2P57739 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLDN2P57739 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLDN2P57739 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN2P57739 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN2P57739 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CLDN2P57739 INTS4P1-201ENST00000438455 1935 ntBASIC17.79■□□□□ 0.44
CLDN2P57739 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN2P57739 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN2P57739 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN2P57739 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
CLDN2P57739 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN2P57739 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN2P57739 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN2P57739 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.79■□□□□ 0.44
CLDN2P57739 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.79■□□□□ 0.44
CLDN2P57739 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN2P57739 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.79■□□□□ 0.44
CLDN2P57739 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.79■□□□□ 0.44
CLDN2P57739 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CLDN2P57739 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLDN2P57739 AC148477.8-201ENST00000624298 468 ntBASIC17.79■□□□□ 0.44
CLDN2P57739 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms