Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
AP1S2P56377 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP1S2P56377 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP1S2P56377 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AP1S2P56377 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S2P56377 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S2P56377 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
AP1S2P56377 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 AC018470.1-201ENST00000624790 3129 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 RCN1P1-201ENST00000400413 996 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.62■□□□□ 0.41
AP1S2P56377 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.62■□□□□ 0.41
AP1S2P56377 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 KRT18P48-201ENST00000434763 852 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.62■□□□□ 0.41
AP1S2P56377 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.62■□□□□ 0.41
AP1S2P56377 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 LINC01238-205ENST00000567549 1107 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S2P56377 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.62■□□□□ 0.41
AP1S2P56377 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AP1S2P56377 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP1S2P56377 HTR7P1-202ENST00000624664 4411 ntBASIC17.62■□□□□ 0.41
AP1S2P56377 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
AP1S2P56377 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
AP1S2P56377 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
AP1S2P56377 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.61■□□□□ 0.41
AP1S2P56377 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 AC063952.2-201ENST00000498792 1227 ntBASIC17.61■□□□□ 0.41
AP1S2P56377 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
AP1S2P56377 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.61■□□□□ 0.41
AP1S2P56377 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.61■□□□□ 0.41
AP1S2P56377 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.61■□□□□ 0.41
AP1S2P56377 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP1S2P56377 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.61■□□□□ 0.41
AP1S2P56377 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
AP1S2P56377 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S2P56377 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S2P56377 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S2P56377 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.6■□□□□ 0.41
AP1S2P56377 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.6■□□□□ 0.41
AP1S2P56377 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP1S2P56377 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms