Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH12P55289 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH12P55289 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 AC008550.1-201ENST00000511500 884 ntBASIC16.89■□□□□ 0.29
CDH12P55289 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.89■□□□□ 0.29
CDH12P55289 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH12P55289 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH12P55289 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 SIRPAP1-201ENST00000448467 1770 ntBASIC16.89■□□□□ 0.29
CDH12P55289 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH12P55289 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH12P55289 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH12P55289 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH12P55289 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH12P55289 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 TSPY7P-201ENST00000431358 1114 ntBASIC16.88■□□□□ 0.29
CDH12P55289 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 RBM17P1-201ENST00000453646 1190 ntBASIC16.88■□□□□ 0.29
CDH12P55289 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.88■□□□□ 0.29
CDH12P55289 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.88■□□□□ 0.29
CDH12P55289 MIR3180-5-201ENST00000583743 153 ntBASIC16.88■□□□□ 0.29
CDH12P55289 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CDH12P55289 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH12P55289 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH12P55289 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH12P55289 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH12P55289 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH12P55289 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH12P55289 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 UNC93B2-201ENST00000285383 730 ntBASIC16.87■□□□□ 0.29
CDH12P55289 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 MIR718-201ENST00000390190 70 ntBASIC16.87■□□□□ 0.29
CDH12P55289 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.87■□□□□ 0.29
CDH12P55289 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH12P55289 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH12P55289 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH12P55289 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms