Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.59■□□□□ 0.41
EMP3P54852 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.59■□□□□ 0.41
EMP3P54852 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC17.59■□□□□ 0.41
EMP3P54852 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.59■□□□□ 0.41
EMP3P54852 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.59■□□□□ 0.41
EMP3P54852 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.59■□□□□ 0.41
EMP3P54852 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EMP3P54852 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.59■□□□□ 0.41
EMP3P54852 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 AC008894.3-201ENST00000624324 3103 ntBASIC17.58■□□□□ 0.41
EMP3P54852 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.58■□□□□ 0.41
EMP3P54852 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.58■□□□□ 0.41
EMP3P54852 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EMP3P54852 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.58■□□□□ 0.41
EMP3P54852 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
EMP3P54852 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.58■□□□□ 0.4
EMP3P54852 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.58■□□□□ 0.4
EMP3P54852 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 AL136038.3-201ENST00000561909 1096 ntBASIC17.58■□□□□ 0.4
EMP3P54852 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
EMP3P54852 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.58■□□□□ 0.4
EMP3P54852 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.58■□□□□ 0.4
EMP3P54852 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.58■□□□□ 0.4
EMP3P54852 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.58■□□□□ 0.4
EMP3P54852 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
EMP3P54852 AC018695.7-201ENST00000624587 2492 ntBASIC17.58■□□□□ 0.4
EMP3P54852 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
EMP3P54852 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.58■□□□□ 0.4
EMP3P54852 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EMP3P54852 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
EMP3P54852 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 LINC00896-202ENST00000609602 2128 ntBASIC17.57■□□□□ 0.4
EMP3P54852 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 ESPNP-201ENST00000270691 2015 ntBASIC17.57■□□□□ 0.4
EMP3P54852 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.57■□□□□ 0.4
EMP3P54852 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 HBZP1-201ENST00000354915 429 ntBASIC17.57■□□□□ 0.4
EMP3P54852 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.57■□□□□ 0.4
EMP3P54852 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC17.57■□□□□ 0.4
EMP3P54852 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.57■□□□□ 0.4
EMP3P54852 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.57■□□□□ 0.4
EMP3P54852 ZNF444P1-201ENST00000559497 298 ntBASIC17.57■□□□□ 0.4
EMP3P54852 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.57■□□□□ 0.4
EMP3P54852 AL157888.1-201ENST00000631930 593 ntBASIC17.57■□□□□ 0.4
EMP3P54852 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EMP3P54852 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.57■□□□□ 0.4
EMP3P54852 AC008764.6-201ENST00000595909 2069 ntBASIC17.57■□□□□ 0.4
EMP3P54852 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms