Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA4P54764 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHA4P54764 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA4P54764 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.39■□□□□ 0.37
EPHA4P54764 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.39■□□□□ 0.37
EPHA4P54764 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.39■□□□□ 0.37
EPHA4P54764 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.39■□□□□ 0.37
EPHA4P54764 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.39■□□□□ 0.37
EPHA4P54764 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHA4P54764 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
EPHA4P54764 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.39■□□□□ 0.37
EPHA4P54764 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EPHA4P54764 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 AC125634.1-201ENST00000438758 1403 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
EPHA4P54764 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA4P54764 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA4P54764 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EPHA4P54764 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 HCG11-201ENST00000411553 5696 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.38■□□□□ 0.37
EPHA4P54764 AC112698.1-201ENST00000510299 916 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 AC106795.1-205ENST00000512851 1056 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 AL662844.1-201ENST00000546340 181 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 ESPNP-201ENST00000270691 2015 ntBASIC17.38■□□□□ 0.37
EPHA4P54764 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EPHA4P54764 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA4P54764 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.38■□□□□ 0.37
EPHA4P54764 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.38■□□□□ 0.37
EPHA4P54764 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA4P54764 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 AP002469.2-201ENST00000531724 424 ntBASIC17.37■□□□□ 0.37
EPHA4P54764 AC126763.1-201ENST00000552015 2118 ntBASIC17.37■□□□□ 0.37
EPHA4P54764 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.37■□□□□ 0.37
EPHA4P54764 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.37■□□□□ 0.37
EPHA4P54764 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EPHA4P54764 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA4P54764 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.37■□□□□ 0.37
EPHA4P54764 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
EPHA4P54764 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EPHA4P54764 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.36■□□□□ 0.37
EPHA4P54764 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHA4P54764 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHA4P54764 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms