Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.85■□□□□ 0.61
EPHB3P54753 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 AL031284.1-201ENST00000419297 478 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 FGFR3P6-201ENST00000457012 610 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 AC093909.1-201ENST00000504731 1122 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 AC073648.2-201ENST00000510116 352 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 AP001269.4-201ENST00000609611 512 ntBASIC18.85■□□□□ 0.61
EPHB3P54753 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
EPHB3P54753 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.85■□□□□ 0.61
EPHB3P54753 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHB3P54753 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
EPHB3P54753 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.85■□□□□ 0.61
EPHB3P54753 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHB3P54753 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.84■□□□□ 0.61
EPHB3P54753 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EPHB3P54753 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.84■□□□□ 0.61
EPHB3P54753 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
EPHB3P54753 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.84■□□□□ 0.61
EPHB3P54753 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHB3P54753 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
EPHB3P54753 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
EPHB3P54753 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
EPHB3P54753 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.84■□□□□ 0.61
EPHB3P54753 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
EPHB3P54753 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
EPHB3P54753 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB3P54753 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
EPHB3P54753 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB3P54753 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB3P54753 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB3P54753 AC132938.6-201ENST00000623828 1655 ntBASIC18.83■□□□□ 0.61
EPHB3P54753 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
EPHB3P54753 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 ABCD1P5-201ENST00000445663 754 ntBASIC18.83■□□□□ 0.6
EPHB3P54753 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB3P54753 RNPS1P1-201ENST00000507437 918 ntBASIC18.83■□□□□ 0.6
EPHB3P54753 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.83■□□□□ 0.6
EPHB3P54753 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.83■□□□□ 0.6
EPHB3P54753 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.83■□□□□ 0.6
EPHB3P54753 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB3P54753 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
EPHB3P54753 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
EPHB3P54753 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.83■□□□□ 0.6
EPHB3P54753 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
EPHB3P54753 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.83■□□□□ 0.6
EPHB3P54753 AP005117.1-201ENST00000584346 1413 ntBASIC18.83■□□□□ 0.6
EPHB3P54753 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB3P54753 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHB3P54753 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
EPHB3P54753 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.82■□□□□ 0.6
EPHB3P54753 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.82■□□□□ 0.6
EPHB3P54753 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 RNA5SP419-201ENST00000515908 135 ntBASIC18.82■□□□□ 0.6
EPHB3P54753 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
EPHB3P54753 AC148477.8-201ENST00000624298 468 ntBASIC18.82■□□□□ 0.6
EPHB3P54753 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.82■□□□□ 0.6
EPHB3P54753 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
EPHB3P54753 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms