Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAD23BP54727 ARMC10P1-201ENST00000313754 855 ntBASIC19.33■□□□□ 0.68
RAD23BP54727 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.33■□□□□ 0.68
RAD23BP54727 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.33■□□□□ 0.68
RAD23BP54727 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.33■□□□□ 0.68
RAD23BP54727 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
RAD23BP54727 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
RAD23BP54727 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAD23BP54727 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
RAD23BP54727 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAD23BP54727 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAD23BP54727 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.33■□□□□ 0.68
RAD23BP54727 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAD23BP54727 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.33■□□□□ 0.68
RAD23BP54727 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RAD23BP54727 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.32■□□□□ 0.68
RAD23BP54727 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAD23BP54727 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.32■□□□□ 0.68
RAD23BP54727 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.32■□□□□ 0.68
RAD23BP54727 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.32■□□□□ 0.68
RAD23BP54727 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.32■□□□□ 0.68
RAD23BP54727 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.32■□□□□ 0.68
RAD23BP54727 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.32■□□□□ 0.68
RAD23BP54727 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 AC005332.3-201ENST00000589904 676 ntBASIC19.32■□□□□ 0.68
RAD23BP54727 AC004263.2-201ENST00000617183 678 ntBASIC19.32■□□□□ 0.68
RAD23BP54727 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.32■□□□□ 0.68
RAD23BP54727 AL390961.4-201ENST00000623958 2535 ntBASIC19.32■□□□□ 0.68
RAD23BP54727 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 LINC00602-201ENST00000629776 2065 ntBASIC19.32■□□□□ 0.68
RAD23BP54727 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAD23BP54727 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.32■□□□□ 0.68
RAD23BP54727 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.31■□□□□ 0.68
RAD23BP54727 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.31■□□□□ 0.68
RAD23BP54727 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 GPR32P1-201ENST00000601788 811 ntBASIC19.31■□□□□ 0.68
RAD23BP54727 AL390719.2-201ENST00000606993 987 ntBASIC19.31■□□□□ 0.68
RAD23BP54727 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 AC116407.4-201ENST00000623319 1061 ntBASIC19.31■□□□□ 0.68
RAD23BP54727 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RAD23BP54727 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RAD23BP54727 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.31■□□□□ 0.68
RAD23BP54727 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAD23BP54727 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms