Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 SLC25A6P5-201ENST00000435663 894 ntBASIC15.72■□□□□ 0.11
ATP1B3P54709 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC008550.1-201ENST00000511500 884 ntBASIC15.72■□□□□ 0.11
ATP1B3P54709 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP1B3P54709 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.72■□□□□ 0.11
ATP1B3P54709 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ATP1B3P54709 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ATP1B3P54709 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ATP1B3P54709 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ATP1B3P54709 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.71■□□□□ 0.11
ATP1B3P54709 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.71■□□□□ 0.11
ATP1B3P54709 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ATP1B3P54709 BX088651.1-201ENST00000540551 451 ntBASIC15.71■□□□□ 0.11
ATP1B3P54709 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.71■□□□□ 0.11
ATP1B3P54709 AL023803.3-201ENST00000615559 522 ntBASIC15.71■□□□□ 0.11
ATP1B3P54709 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 AC116562.4-202ENST00000641738 218 ntBASIC15.71■□□□□ 0.11
ATP1B3P54709 FLJ13224-201ENST00000313737 1514 ntBASIC15.71■□□□□ 0.11
ATP1B3P54709 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ATP1B3P54709 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.71■□□□□ 0.11
ATP1B3P54709 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATP1B3P54709 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.71■□□□□ 0.1
ATP1B3P54709 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.71■□□□□ 0.1
ATP1B3P54709 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.71■□□□□ 0.1
ATP1B3P54709 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ATP1B3P54709 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.7■□□□□ 0.1
ATP1B3P54709 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATP1B3P54709 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATP1B3P54709 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 OR6D1P-203ENST00000641209 4860 ntBASIC15.7■□□□□ 0.1
ATP1B3P54709 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.7■□□□□ 0.1
ATP1B3P54709 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATP1B3P54709 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.7■□□□□ 0.1
ATP1B3P54709 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATP1B3P54709 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms