Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.91■□□□□ 0.78
PMS1P54277 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PMS1P54277 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PMS1P54277 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS1P54277 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS1P54277 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.9■□□□□ 0.78
PMS1P54277 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.9■□□□□ 0.78
PMS1P54277 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.9■□□□□ 0.78
PMS1P54277 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PMS1P54277 AC139713.2-201ENST00000641328 2723 ntBASIC19.9■□□□□ 0.78
PMS1P54277 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PMS1P54277 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PMS1P54277 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PMS1P54277 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.9■□□□□ 0.78
PMS1P54277 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PMS1P54277 AIRN-201ENST00000601203 4374 ntBASIC19.9■□□□□ 0.78
PMS1P54277 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PMS1P54277 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PMS1P54277 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PMS1P54277 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.89■□□□□ 0.78
PMS1P54277 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PMS1P54277 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PMS1P54277 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS1P54277 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 AP000523.1-201ENST00000398242 1049 ntBASIC19.89■□□□□ 0.77
PMS1P54277 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS1P54277 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.89■□□□□ 0.77
PMS1P54277 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS1P54277 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.89■□□□□ 0.77
PMS1P54277 AC133561.5-201ENST00000635547 218 ntBASIC19.89■□□□□ 0.77
PMS1P54277 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS1P54277 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PMS1P54277 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.89■□□□□ 0.77
PMS1P54277 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PMS1P54277 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 AL645608.8-201ENST00000606034 2086 ntBASIC19.88■□□□□ 0.77
PMS1P54277 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
PMS1P54277 SPDYE15P-201ENST00000424157 909 ntBASIC19.88■□□□□ 0.77
PMS1P54277 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.88■□□□□ 0.77
PMS1P54277 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 AC097493.4-201ENST00000641197 219 ntBASIC19.88■□□□□ 0.77
PMS1P54277 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PMS1P54277 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PMS1P54277 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PMS1P54277 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PMS1P54277 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PMS1P54277 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.87■□□□□ 0.77
PMS1P54277 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.87■□□□□ 0.77
PMS1P54277 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 AC073508.3-201ENST00000619697 1419 ntBASIC19.87■□□□□ 0.77
PMS1P54277 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.87■□□□□ 0.77
PMS1P54277 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.87■□□□□ 0.77
PMS1P54277 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.87■□□□□ 0.77
PMS1P54277 RASA4DP-201ENST00000460726 1199 ntBASIC19.87■□□□□ 0.77
PMS1P54277 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PMS1P54277 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.87■□□□□ 0.77
PMS1P54277 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 AL355312.1-201ENST00000407115 2176 ntBASIC19.87■□□□□ 0.77
PMS1P54277 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PMS1P54277 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms