Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 AC108751.1-201ENST00000490852 363 ntBASIC19.88■□□□□ 0.77
ACLYP53396 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.88■□□□□ 0.77
ACLYP53396 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.88■□□□□ 0.77
ACLYP53396 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.88■□□□□ 0.77
ACLYP53396 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
ACLYP53396 AC004817.3-201ENST00000602957 2129 ntBASIC19.88■□□□□ 0.77
ACLYP53396 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ACLYP53396 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ACLYP53396 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.87■□□□□ 0.77
ACLYP53396 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ACLYP53396 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.87■□□□□ 0.77
ACLYP53396 AP006288.1-201ENST00000446065 395 ntBASIC19.87■□□□□ 0.77
ACLYP53396 KRT18P2-201ENST00000447938 1258 ntBASIC19.87■□□□□ 0.77
ACLYP53396 PRYP5-201ENST00000451909 266 ntBASIC19.87■□□□□ 0.77
ACLYP53396 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.87■□□□□ 0.77
ACLYP53396 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.87■□□□□ 0.77
ACLYP53396 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.87■□□□□ 0.77
ACLYP53396 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.87■□□□□ 0.77
ACLYP53396 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.87■□□□□ 0.77
ACLYP53396 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.87■□□□□ 0.77
ACLYP53396 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ACLYP53396 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.87■□□□□ 0.77
ACLYP53396 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ACLYP53396 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ACLYP53396 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.86■□□□□ 0.77
ACLYP53396 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.86■□□□□ 0.77
ACLYP53396 KRT18P28-201ENST00000453838 1332 ntBASIC19.86■□□□□ 0.77
ACLYP53396 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.86■□□□□ 0.77
ACLYP53396 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.86■□□□□ 0.77
ACLYP53396 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 AC005082.1-201ENST00000413042 2259 ntBASIC19.86■□□□□ 0.77
ACLYP53396 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.86■□□□□ 0.77
ACLYP53396 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ACLYP53396 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ACLYP53396 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
ACLYP53396 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ACLYP53396 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 MCCD1P2-201ENST00000423228 335 ntBASIC19.85■□□□□ 0.77
ACLYP53396 AC136632.2-201ENST00000512891 861 ntBASIC19.85■□□□□ 0.77
ACLYP53396 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.85■□□□□ 0.77
ACLYP53396 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.85■□□□□ 0.77
ACLYP53396 AL596442.2-201ENST00000610240 980 ntBASIC19.85■□□□□ 0.77
ACLYP53396 AD001527.2-201ENST00000622994 785 ntBASIC19.85■□□□□ 0.77
ACLYP53396 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.85■□□□□ 0.77
ACLYP53396 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.85■□□□□ 0.77
ACLYP53396 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.85■□□□□ 0.77
ACLYP53396 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ACLYP53396 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ACLYP53396 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ACLYP53396 AC132938.6-201ENST00000623828 1655 ntBASIC19.84■□□□□ 0.77
ACLYP53396 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ACLYP53396 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms