Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.56■□□□□ 0.4
PDX1P52945 KRT18P41-201ENST00000518924 1277 ntBASIC17.56■□□□□ 0.4
PDX1P52945 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDX1P52945 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.56■□□□□ 0.4
PDX1P52945 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDX1P52945 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.56■□□□□ 0.4
PDX1P52945 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDX1P52945 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.55■□□□□ 0.4
PDX1P52945 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.55■□□□□ 0.4
PDX1P52945 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 GPALPP1-207ENST00000611650 899 ntBASIC17.55■□□□□ 0.4
PDX1P52945 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.55■□□□□ 0.4
PDX1P52945 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PDX1P52945 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDX1P52945 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.54■□□□□ 0.4
PDX1P52945 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.54■□□□□ 0.4
PDX1P52945 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 AL163051.1-201ENST00000569214 1512 ntBASIC17.54■□□□□ 0.4
PDX1P52945 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.54■□□□□ 0.4
PDX1P52945 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PDX1P52945 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PDX1P52945 MINOS1P3-201ENST00000457048 203 ntBASIC17.54■□□□□ 0.4
PDX1P52945 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDX1P52945 AC011840.4-201ENST00000578471 627 ntBASIC17.54■□□□□ 0.4
PDX1P52945 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.54■□□□□ 0.4
PDX1P52945 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.54■□□□□ 0.4
PDX1P52945 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDX1P52945 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDX1P52945 WIZP1-201ENST00000531444 2299 ntBASIC17.54■□□□□ 0.4
PDX1P52945 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 AL590627.1-203ENST00000421194 1026 ntBASIC17.53■□□□□ 0.4
PDX1P52945 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.53■□□□□ 0.4
PDX1P52945 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.53■□□□□ 0.4
PDX1P52945 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.53■□□□□ 0.4
PDX1P52945 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PDX1P52945 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PDX1P52945 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDX1P52945 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms