Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL136967.2-201ENST00000623968 743 ntBASIC17.78■□□□□ 0.44
GTF2A1P52655 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
GTF2A1P52655 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GTF2A1P52655 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GTF2A1P52655 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GTF2A1P52655 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GTF2A1P52655 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GTF2A1P52655 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GTF2A1P52655 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GTF2A1P52655 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.78■□□□□ 0.44
GTF2A1P52655 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.78■□□□□ 0.44
GTF2A1P52655 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GTF2A1P52655 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GTF2A1P52655 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GTF2A1P52655 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.77■□□□□ 0.44
GTF2A1P52655 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 CICP14-201ENST00000629111 2732 ntBASIC17.77■□□□□ 0.44
GTF2A1P52655 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GTF2A1P52655 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 AC010141.2-201ENST00000452426 721 ntBASIC17.77■□□□□ 0.44
GTF2A1P52655 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.77■□□□□ 0.44
GTF2A1P52655 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.77■□□□□ 0.44
GTF2A1P52655 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.77■□□□□ 0.44
GTF2A1P52655 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GTF2A1P52655 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
GTF2A1P52655 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GTF2A1P52655 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.77■□□□□ 0.43
GTF2A1P52655 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GTF2A1P52655 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
GTF2A1P52655 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GTF2A1P52655 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GTF2A1P52655 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GTF2A1P52655 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
GTF2A1P52655 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.77■□□□□ 0.43
GTF2A1P52655 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.77■□□□□ 0.43
GTF2A1P52655 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
GTF2A1P52655 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.76■□□□□ 0.43
GTF2A1P52655 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GTF2A1P52655 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.76■□□□□ 0.43
GTF2A1P52655 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.76■□□□□ 0.43
GTF2A1P52655 AC131212.1-201ENST00000613771 668 ntBASIC17.76■□□□□ 0.43
GTF2A1P52655 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
GTF2A1P52655 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
GTF2A1P52655 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GTF2A1P52655 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GTF2A1P52655 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GTF2A1P52655 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.75■□□□□ 0.43
GTF2A1P52655 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.75■□□□□ 0.43
GTF2A1P52655 AL031432.3-201ENST00000607698 485 ntBASIC17.75■□□□□ 0.43
GTF2A1P52655 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
GTF2A1P52655 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GTF2A1P52655 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GTF2A1P52655 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms