Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.81■□□□□ 0.76
CDR1P51861 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 RASA4DP-201ENST00000460726 1199 ntBASIC19.81■□□□□ 0.76
CDR1P51861 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.81■□□□□ 0.76
CDR1P51861 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.81■□□□□ 0.76
CDR1P51861 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.81■□□□□ 0.76
CDR1P51861 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 AC079602.3-201ENST00000623931 403 ntBASIC19.81■□□□□ 0.76
CDR1P51861 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.81■□□□□ 0.76
CDR1P51861 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.81■□□□□ 0.76
CDR1P51861 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDR1P51861 AC006333.2-201ENST00000607957 2099 ntBASIC19.8■□□□□ 0.76
CDR1P51861 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.8■□□□□ 0.76
CDR1P51861 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.8■□□□□ 0.76
CDR1P51861 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDR1P51861 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
CDR1P51861 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 KRT18P23-201ENST00000435622 1283 ntBASIC19.8■□□□□ 0.76
CDR1P51861 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.8■□□□□ 0.76
CDR1P51861 AC112497.1-201ENST00000624824 639 ntBASIC19.8■□□□□ 0.76
CDR1P51861 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDR1P51861 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDR1P51861 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDR1P51861 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR1P51861 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.79■□□□□ 0.76
CDR1P51861 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 AL357033.4-201ENST00000617703 1807 ntBASIC19.79■□□□□ 0.76
CDR1P51861 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 AL109659.2-201ENST00000606809 1674 ntBASIC19.79■□□□□ 0.76
CDR1P51861 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR1P51861 STARP1-201ENST00000397973 869 ntBASIC19.79■□□□□ 0.76
CDR1P51861 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.79■□□□□ 0.76
CDR1P51861 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.79■□□□□ 0.76
CDR1P51861 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.79■□□□□ 0.76
CDR1P51861 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.79■□□□□ 0.76
CDR1P51861 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDR1P51861 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 IER3-202ENST00000376377 1350 ntBASIC19.79■□□□□ 0.76
CDR1P51861 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDR1P51861 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDR1P51861 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDR1P51861 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDR1P51861 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDR1P51861 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.78■□□□□ 0.76
CDR1P51861 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CDR1P51861 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDR1P51861 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR1P51861 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR1P51861 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.78■□□□□ 0.76
CDR1P51861 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.78■□□□□ 0.76
CDR1P51861 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDR1P51861 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.78■□□□□ 0.76
CDR1P51861 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CDR1P51861 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms